BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030H01SP1|AL429291
(966 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1274 1883 0.0
>3x_Contig1274
Length = 5941
Score = 1883 bits (949), Expect = 0.0
Identities = 963/967 (99%), Gaps = 1/967 (0%)
Strand = Plus / Minus
Query: 1 atcatcgcattgatcttttggaaatacgaccctgtgatgtactgtaatacatcgatcgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2731 atcatcgcattgatcttttggaaatacgaccctgtgatgtactgtaatacatcgatcgtg 2672
Query: 61 tgtccgaacgaattcgatatcaaattcacaccgctctcgatgtcgtacaaatactccggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2671 tgtccgaacgaattcgatatcaaattcacaccgctctcgatgtcgtacaaatactccggc 2612
Query: 121 gatctcattggacgttcatacccataccaaccaccgttgcccgatatctcgatggaattg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2611 gatctcattggacgttcatacccataccaaccaccgttgcccgatatctcgatggaattg 2552
Query: 181 atgtctccgatacaaccttcgctgattaactctttggcccgaacgatgtatggcgattta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2551 atgtctccgatacaaccttcgctgattaactctttggcccgaacgatgtatggcgattta 2492
Query: 241 cgtccttggagacatatgatcgtttgtaaattggcacgctgctgagatatcgaatacaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2491 cgtccttggagacatatgatcgtttgtaaattggcacgctgctgagatatcgaatacaac 2432
Query: 301 tcttctgcctgttgtacgcttgcagcaagagcccattccacgtacaaataccttagattc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2431 tcttctgcctgttgtacgcttgcagcaagagcccattccacgtacaaataccttagattc 2372
Query: 361 aggttctgggacgaatgttccaatatattcttgaccacctcgtaatgctctggcactttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2371 aggttctgggacgaatgttccaatatattcttgaccacctcgtaatgctctggcactttt 2312
Query: 421 acactaacaacgatcatatcgatatctttatactgagcaaaagattccaacgaatcaaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2311 acactaacaacgatcatatcgatatctttatactgagcaaaagattccaacgaatcaaac 2252
Query: 481 cctgtagcatgtttcaattgcaactgttcaatggtctgaagactcgatttcaaagtaggg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2251 cctgtagcatgtttcaattgcaactgttcaatggtctgaagactcgatttcaaagtaggg 2192
Query: 541 ttgtacaaggccactatctggaactgtgaactgagctgctgtatggctaagaaatgcgtc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2191 ttgtacaaggccactatctggaactgtgaactgagctgctgtatggctaagaaatgcgtc 2132
Query: 601 ttggcaacccaacttttaccactggttaacccaacgaaaccaacacggatcggtctactc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2131 ttggcaacccaacttttaccactggttaacccaacgaaaccaacacggatcggtctactc 2072
Query: 661 gatggcaccgtggataatttggaccgtttgttattgttcatgatgccgtcctgccgagat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2071 gatggcaccgtggataatttggaccgtttgttattgttcatgatgccgtcctgccgagat 2012
Query: 721 attgtgtacactggatcaaataataacactttcaaagtgactaaatcacaattgtcccaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2011 attgtgtacactggatcaaataataacactttcaaagtgactaaatcacaattgtcccaa 1952
Query: 781 gatatactatagctctctgtttaacctttatattgtcaaaaagggacaatgaatgaaagt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1951 gatatactatagctctctgtttaacctttatattgtcaaaaagggacaatgaatgaaagt 1892
Query: 841 acaaacacaaacacaaacacaatggaagggagtgtccagggtggtgattcctgactgttc 900
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1891 acaaacacaaacacaaacacaatggaagggagtgtccagggtggtgattcctgactgtac 1832
Query: 901 tgattcgacggagttttatttgatttcgttgaagtggttwaagtg-attattcttgaatt 959
||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||
Sbjct: 1831 tgattcgacggagttttatttgatttcgttgaagtggttaaagtgaataattcttgaatt 1772
Query: 960 gagagga 966
|||||||
Sbjct: 1771 gagagga 1765
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6252
Number of Sequences: 1807
Number of extensions: 6252
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 966
length of database: 10,358,551
effective HSP length: 16
effective length of query: 950
effective length of database: 10,329,639
effective search space: 9813157050
effective search space used: 9813157050
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)